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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5470025_5470471_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5470025 - 5470471

Intron Length:

447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGTTAGC

5'SS Class:

major

3'SS Sequence:

TTTACTATTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAA

U12 Branch Point Sequence:

TGTTTCAGAACT

Flanking Amino Acid:

VWSGPPPQCKVVKCENPKVP

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.3

0.31

1.3

61.1

43.6

Major BPS

61.8

0.29

1.1

69.7

35.6

Major PPT

84.6

0.78

0.8

34.1

Minor 5ss

31.1

-2.2

2.7

39.4

Minor BPS

61.8

0.45

1.7

82.74

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039979

5465538 - 5474734

9197

ENSAPLT00000028447

5465538 - 5495980

30443