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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5470679_5470834_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5470679 - 5470834

Intron Length:

156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

GATTTATTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTTAT

U12 Branch Point Sequence:

TGTGATTTATTT

Flanking Amino Acid:

DWDGVLPFCERVPCEPPPSI

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

1.2

83.2

30.8

Major BPS

70.9

0.52

1.2

63.7

43.9

Major PPT

75.6

0.58

0.9

66.9

43.8

Minor 5ss

36.4

-1.5

2.7

41.6

38.3

Minor BPS

49.1

0.01

1.8

69.14

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039979

5465538 - 5474734

9197

ENSAPLT00000028447

5465538 - 5495980

30443