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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5471690_5471889_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5471690 - 5471889

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACGTGT

5'SS Class:

major

3'SS Sequence:

CCTTTCTCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTTAT

U12 Branch Point Sequence:

GTAGACTTATTT

Flanking Amino Acid:

RWSPTEEFCTARKCRHPGEL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.2

66.5

41.6

Major BPS

65.9

0.39

1.2

57.6

41.3

Major PPT

80.4

0.68

0.7

72.7

32.1

Minor 5ss

38.5

-1.3

3.4

55.9

48.3

Minor BPS

48.9

-0

1.9

66.58

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039979

5465538 - 5474734

9197

ENSAPLT00000028447

5465538 - 5495980

30443