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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5475057_5475206_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5475057 - 5475206

Intron Length:

150

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCCTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GTGAAAATAATA

Flanking Amino Acid:

TSRKSGSVGLGVAAAAVLLL

Intron Amino Acid Position:

621

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.2

39.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

83.1

0.74

0.7

80.9

24.3

Minor 5ss

39.7

-1.2

2.9

52.1

44.7

Minor BPS

42.5

-0.5

1.9

52.54

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030333

5474653 - 5482271

7619

ENSAPLT00000021037

5474653 - 5482271

7619