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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5475237_5475860_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5475237 - 5475860

Intron Length:

624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCCCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAGAA

U12 Branch Point Sequence:

GTTTACTGACTT

Flanking Amino Acid:

WDPPVPACKLTSRKSGSVGL

Intron Amino Acid Position:

611

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

26.3

Major BPS

0.5

39.8

Major PPT

83.8

0.76

0.7

81.1

24.1

Minor 5ss

36.1

-1.6

3.3

49.4

41.3

Minor BPS

51.6

0.13

1.9

74.83

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030333

5474653 - 5482271

7619

ENSAPLT00000021037

5474653 - 5482271

7619