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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5476041_5477216_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5476041 - 5477216

Intron Length:

1176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTAATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTATTTCTAATT

Flanking Amino Acid:

TWSQPPPRCEEIRCVFPEVQ

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

36.6

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

84.1

0.77

0.8

78.5

33.5

Minor 5ss

36.9

-1.5

3.2

48.2

47.9

Minor BPS

63.4

0.5

1.6

80.83

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030333

5474653 - 5482271

7619

ENSAPLT00000021037

5474653 - 5482271

7619