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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5477400_5477747_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5477400 - 5477747

Intron Length:

348

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CCTGACTTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

TCTCCCTGACTT

Flanking Amino Acid:

AWSHPPPVCQAVKCPLPPNI

Intron Amino Acid Position:

490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.8

83.1

28.7

Major BPS

0.79

0.8

83.7

25.7

Major PPT

75.2

0.57

0.9

40.9

Minor 5ss

39.3

-1.2

3.3

57.3

47.4

Minor BPS

55.5

0.25

1.8

74.16

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030333

5474653 - 5482271

7619

ENSAPLT00000021037

5474653 - 5482271

7619