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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5477931_5478440_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5477931 - 5478440

Intron Length:

510

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCTCTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTGTTTTAATC

Flanking Amino Acid:

WDPPLPACSRVKRCSKPPAI

Intron Amino Acid Position:

429

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

74.6

37.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.6

0.64

0.7

25.1

Minor 5ss

37.6

-1.4

3.3

50.9

45.8

Minor BPS

65.3

0.46

1.3

69.9

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030333

5474653 - 5482271

7619

ENSAPLT00000021037

5474653 - 5482271

7619