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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5478994_5479156_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5478994 - 5479156

Intron Length:

163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCTA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTCTGTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

ACCTTCTCACCT

Flanking Amino Acid:

YHHLDTTVRPVVMCLPPPGI

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

38.6

Major BPS

0.87

0.8

85.6

Major PPT

76.9

0.61

0.9

76.7

31.9

Minor 5ss

36.4

-1.5

3.3

49.3

46.9

Minor BPS

49.3

0.03

1.8

65.57

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021037

5474653 - 5482271

7619