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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5479786_5479866_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5479786 - 5479866

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGGA

5'SS Class:

major

3'SS Sequence:

ATTTCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGAGAT

U12 Branch Point Sequence:

CCTCTCTGAGAT

Flanking Amino Acid:

AWSGDLPICQKVVCPAPQIQ

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

66.1

40.1

Major BPS

51.7

0.04

1.3

50.1

44.2

Major PPT

88.1

0.86

0.7

85.6

28.2

Minor 5ss

33.3

-1.9

3.2

36.6

41.7

Minor BPS

45.1

-0.2

1.8

59.14

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021037

5474653 - 5482271

7619

ENSAPLT00000030333

5474653 - 5482271

7619