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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5480599_5480870_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5480599 - 5480870

Intron Length:

272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAATAGC

5'SS Class:

major

3'SS Sequence:

TGTTCTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAC

U12 Branch Point Sequence:

GGAGTTTAAACT

Flanking Amino Acid:

TWSEARAFCKRKQCRYPEAP

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

68.4

36.7

Major BPS

72.4

0.56

79.3

29.5

Major PPT

83.9

0.76

0.8

76.7

37.4

Minor 5ss

31.7

-2.1

2.8

36.4

34.4

Minor BPS

48.1

-0

1.7

61.37

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030333

5474653 - 5482271

7619

ENSAPLT00000021037

5474653 - 5482271

7619