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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5488794_5488835_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5488794 - 5488835

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCTTCCATC

5'SS Class:

weak_major

3'SS Sequence:

GATGAACGGGGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTCCAT

U12 Branch Point Sequence:

ATCTTCTGCACC

Flanking Amino Acid:

AASPATRCRESGADRPRCAE

Intron Amino Acid Position:

367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.2

0.19

1.4

61.9

47.1

Major BPS

0.37

1.3

76.1

Major PPT

40.3

-0.5

1.7

32.5

Minor 5ss

41.6

-0.9

3.8

43.6

Minor BPS

50.5

-0

1.9

64.94

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019016

5488676 - 5495352

6677