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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5491525_5491665_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5491525 - 5491665

Intron Length:

141

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGA|GCCAGCCCA

5'SS Class:

weak_major

3'SS Sequence:

GGGGATGGGGAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

CTGTGGTGAAGG

Flanking Amino Acid:

ACGLQNLGELDLYRFHVDFA

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.3

0.08

1.3

50.4

Major BPS

0.52

1.1

77.7

35.3

Major PPT

42.2

-0.4

1.2

29.3

41.1

Minor 5ss

24.5

-2.9

3.7

28.3

36.5

Minor BPS

37.3

-1.1

2.5

43.2

48.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037108

5488211 - 5493717

5507