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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5491694_5491960_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5491694 - 5491960

Intron Length:

267

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGAGAG

5'SS Class:

major

3'SS Sequence:

CGGAAATGCTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

CTCGTCGGAAAT

Flanking Amino Acid:

GGSWDPPVLACGLQNLGELD

Intron Amino Acid Position:

322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.4

0.34

1.1

55.4

37.7

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

51.8

0.04

1.1

46.7

44.6

Minor 5ss

27.2

-2.6

3.3

39.1

46.1

Minor BPS

41.2

-0.5

2.2

56.8

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037108

5488211 - 5493717

5507