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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5491825_5491960_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5491825 - 5491960

Intron Length:

136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGAGAG

5'SS Class:

major

3'SS Sequence:

CACCCTCTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CTCACCTGGACT

Flanking Amino Acid:

GGSWDPPVLAFRPCPMPPKI

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.4

0.34

1.1

55.4

37.7

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

75.5

0.57

0.8

68.6

31.3

Minor 5ss

27.2

-2.6

3.3

39.1

46.1

Minor BPS

58.6

0.35

1.6

72.73

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019016

5488676 - 5495352

6677