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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5493159_5493293_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5493159 - 5493293

Intron Length:

135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGAGAG

5'SS Class:

major

3'SS Sequence:

CGCCCCCTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CTCACCTGGACT

Flanking Amino Acid:

GGTWDPPVLAFRPCPTPPKI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.4

0.34

1.1

55.4

37.7

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

72.4

0.51

0.8

64.8

30.7

Minor 5ss

27.2

-2.6

3.3

39.1

46.1

Minor BPS

58.6

0.35

1.6

72.73

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037108

5488211 - 5493717

5507