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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5507574_5508206_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5507574 - 5508206

Intron Length:

633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAAAAT

U12 Branch Point Sequence:

ATACAGCTAATG

Flanking Amino Acid:

TWAWDPDFCIGKSCPEPDIE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

61.8

0.29

1.1

67.7

34.6

Major PPT

66.9

0.38

0.7

57.1

27.1

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

39.4

-0.9

2.3

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018131

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035892

5494286 - 5508579

14294