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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5509769_5509959_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5509769 - 5509959

Intron Length:

191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCCATGTCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TATTCCATAGAT

Flanking Amino Acid:

TIKKCGVRQKGTYKPNPTNA

Intron Amino Acid Position:

676

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

72.3

39.5

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

76.2

0.59

0.9

72.7

37.5

Minor 5ss

31.6

-2.1

3.1

31.9

42.5

Minor BPS

56.8

0.29

80.2

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039551

5509690 - 5523865

14176

ENSAPLT00000026853

5509690 - 5523865

14176