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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5510015_5510705_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5510015 - 5510705

Intron Length:

691

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

GCTTGCTTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

CTTGCTTCCAAG

Flanking Amino Acid:

LPLIIIPCIIGIVVIVIWTI

Intron Amino Acid Position:

658

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

84.9

26.3

Major BPS

84.8

0.86

85.7

34.9

Major PPT

62.8

0.29

1.1

59.6

40.8

Minor 5ss

32.1

-2

2.8

39.2

40.5

Minor BPS

41.6

-0.8

2.1

48.05

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039551

5509690 - 5523865

14176

ENSAPLT00000026853

5509690 - 5523865

14176