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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5510733_5511288_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5510733 - 5511288

Intron Length:

556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAAGGGCT

5'SS Class:

major

3'SS Sequence:

TTTTCTTCTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

EKTSEYRYILPLIIIPCIIG

Intron Amino Acid Position:

649

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.3

70.5

38.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.8

0.85

0.6

81.8

30.3

Minor 5ss

33.2

-1.9

3.6

47.1

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039551

5509690 - 5523865

14176

ENSAPLT00000026853

5509690 - 5523865

14176