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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5511813_5511969_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5511813 - 5511969

Intron Length:

157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCATCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

CCTTTTGCATCT

Flanking Amino Acid:

GSKADVICDDGYMLTLGLPF

Intron Amino Acid Position:

583

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

68.5

38.7

Major BPS

0.62

1.4

85.7

34.9

Major PPT

76.5

0.6

0.8

74.8

34.8

Minor 5ss

26.2

-2.7

2.9

22.7

37.4

Minor BPS

40.9

-0.6

2.2

58.46

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039551

5509690 - 5523865

14176

ENSAPLT00000026853

5509690 - 5523865

14176