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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5512067_5512287_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5512067 - 5512287

Intron Length:

221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAG

U12 Branch Point Sequence:

TGTCCTTGCAGC

Flanking Amino Acid:

TWSEVPELCERESCGPPENP

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

78.5

28.9

Major BPS

0.2

1.5

65.8

39.5

Major PPT

88.8

0.87

0.6

88.4

21.1

Minor 5ss

33.5

-1.9

3.3

43.7

38.1

Minor BPS

-0.4

2.1

57.25

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039551

5509690 - 5523865

14176

ENSAPLT00000026853

5509690 - 5523865

14176