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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5512480_5512888_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5512480 - 5512888

Intron Length:

409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTGAGTAGT

5'SS Class:

major

3'SS Sequence:

TTGTGATCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

GTCACTTCAATT

Flanking Amino Acid:

RWSVLPEFCDRSCFSPPRVS

Intron Amino Acid Position:

487

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.3

70.5

41.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

63.9

0.31

56.8

43.5

Minor 5ss

33.5

-1.9

2.8

38.4

Minor BPS

55.7

0.26

1.6

69.52

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039551

5509690 - 5523865

14176

ENSAPLT00000026853

5509690 - 5523865

14176