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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5519244_5519365_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5519244 - 5519365

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TCATTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TGATCTTCATTC

Flanking Amino Acid:

KEVEKSTPPQNFQGNGIQTD

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

0.9

73.9

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

86.5

0.82

0.7

84.6

Minor 5ss

35.8

-1.6

2.8

40.4

Minor BPS

49.1

-0

1.8

60.16

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026853

5509690 - 5523865

14176

ENSAPLT00000039551

5509690 - 5523865

14176