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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5519426_5519627_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5519426 - 5519627

Intron Length:

202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACTTTC

5'SS Class:

major

3'SS Sequence:

CTTTTTACTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTCTTTTTACTA

Flanking Amino Acid:

VWSGAAPKCKEKSTFVKLGA

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

1.1

78.3

32.5

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

86.5

0.82

0.7

81.1

29.4

Minor 5ss

44.9

-0.6

2.8

61.1

43.8

Minor BPS

60.6

0.33

1.6

69.67

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039551

5509690 - 5523865

14176

ENSAPLT00000026853

5509690 - 5523865

14176