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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5519823_5520262_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5519823 - 5520262

Intron Length:

440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGACTG

5'SS Class:

major

3'SS Sequence:

TTCTTTCATGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTGCTTTTAGCA

Flanking Amino Acid:

VEWSKLPTCELITCSSPPPI

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

68.4

42.4

Major BPS

87.6

0.93

0.9

89.3

Major PPT

85.1

0.79

0.8

81.3

29.5

Minor 5ss

-1.4

3.3

53.1

43.7

Minor BPS

0.25

1.5

68.03

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039551

5509690 - 5523865

14176

ENSAPLT00000026853

5509690 - 5523865

14176