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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5521943_5522656_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5521943 - 5522656

Intron Length:

714

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

TGCTCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

TGGCCGCTCACT

Flanking Amino Acid:

TWSEVAELCRRKSCGQPPAL

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

35.7

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

76.7

0.6

0.8

69.9

30.9

Minor 5ss

33.7

-1.9

2.7

43.9

Minor BPS

41.3

-0.6

2.6

62.87

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039551

5509690 - 5523865

14176

ENSAPLT00000026853

5509690 - 5523865

14176