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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5522849_5523300_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5522849 - 5523300

Intron Length:

452

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAATATC

5'SS Class:

major

3'SS Sequence:

CCTTGATTGCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTGAT

U12 Branch Point Sequence:

CTCTCCTTGATT

Flanking Amino Acid:

RWSQLPEPCGLSCSTPTRLH

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.31

1.3

69.8

40.9

Major BPS

71.5

0.53

1.1

43.2

Major PPT

68.9

0.43

1.1

61.4

43.7

Minor 5ss

41.5

-0.9

2.9

58.8

Minor BPS

75.8

0.89

1.2

82.6

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039551

5509690 - 5523865

14176

ENSAPLT00000026853

5509690 - 5523865

14176