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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5523490_5523729_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5523490 - 5523729

Intron Length:

240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTACG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAC

U12 Branch Point Sequence:

GGATCCTTACCC

Flanking Amino Acid:

LGLLGTPAAHGDCGPPPHMA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

0.9

71.8

39.7

Major BPS

68.9

0.47

59.6

38.6

Major PPT

76.2

0.59

0.9

71.7

32.8

Minor 5ss

31.1

-2.2

2.6

35.7

40.4

Minor BPS

64.5

0.43

1.7

69.17

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039551

5509690 - 5523865

14176

ENSAPLT00000026853

5509690 - 5523865

14176