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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5525934_5526173_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5525934 - 5526173

Intron Length:

240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTGTC

5'SS Class:

major

3'SS Sequence:

TGCTTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCATAC

U12 Branch Point Sequence:

TGCTTTTTTACA

Flanking Amino Acid:

DGNWTPLPKCKKQGEADICE

Intron Amino Acid Position:

670

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

72.6

37.3

Major BPS

55.5

0.14

52.7

33.8

Major PPT

88.2

0.86

0.7

83.2

Minor 5ss

39.2

-1.2

3.4

53.4

43.8

Minor BPS

58.4

0.26

1.6

66.98

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044219

5525616 - 5538506

12891

ENSAPLT00000029501

5525616 - 5538506

12891