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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5526823_5532681_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5526823 - 5532681

Intron Length:

5859

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTCGC

5'SS Class:

major

3'SS Sequence:

GCTCTGCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGACAC

U12 Branch Point Sequence:

TTGGCCTGACAC

Flanking Amino Acid:

VWSGPAPECRVVRCPRPDVE

Intron Amino Acid Position:

543

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

63.1

43.4

Major BPS

48.1

-0.1

1.2

56.1

39.6

Major PPT

68.7

0.42

0.9

61.5

Minor 5ss

28.7

-2.4

2.7

27.4

36.3

Minor BPS

47.3

-0.2

1.9

60.29

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029501

5525616 - 5538506

12891