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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5533283_5533503_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5533283 - 5533503

Intron Length:

221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCAGC

5'SS Class:

major

3'SS Sequence:

CTTCTGTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

AATCCTTTATTT

Flanking Amino Acid:

WDPAVTECTSVPHCPQPVTD

Intron Amino Acid Position:

419

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

1.1

67.1

44.6

Major BPS

82.1

0.8

71.6

36.4

Major PPT

80.4

0.68

0.8

72.8

37.5

Minor 5ss

38.3

-1.3

3.1

51.6

45.2

Minor BPS

59.1

0.37

1.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044219

5525616 - 5538506

12891

ENSAPLT00000029501

5525616 - 5538506

12891

ENSAPLT00000020883

5531647 - 5538506

6860