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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5534246_5534895_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5534246 - 5534895

Intron Length:

650

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

ATTTCACTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

ACGTCCTCAAAT

Flanking Amino Acid:

WEPPLPLCQRSSCDDPPDVF

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

63.4

35.3

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

76.5

0.6

0.8

67.7

38.5

Minor 5ss

30.7

-2.2

3.1

41.6

38.8

Minor BPS

59.6

0.38

1.7

72.1

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020883

5531647 - 5538506

6860

ENSAPLT00000044219

5525616 - 5538506

12891

ENSAPLT00000029501

5525616 - 5538506

12891