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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5537238_5537699_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5537238 - 5537699

Intron Length:

462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTACA

5'SS Class:

major

3'SS Sequence:

TGTTGTCCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

AGGCCCTCACCC

Flanking Amino Acid:

RWKGSTDFCSPKQCSYPGDL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.2

76.7

33.9

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

76.9

0.61

0.9

73.9

36.8

Minor 5ss

-2.1

2.6

Minor BPS

47.5

-0.2

1.8

55.63

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044219

5525616 - 5538506

12891

ENSAPLT00000029501

5525616 - 5538506

12891

ENSAPLT00000020883

5531647 - 5538506

6860