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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5537889_5538365_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5537889 - 5538365

Intron Length:

477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TTTTCCTCACAT

Flanking Amino Acid:

LAAALVVAVQGSCNAPPRIP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

77.6

32.8

Major BPS

82.1

0.8

71.6

36.4

Major PPT

76.6

0.6

73.2

37.2

Minor 5ss

31.6

-2.1

3.1

31.7

42.6

Minor BPS

62.4

0.47

1.9

85.81

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044219

5525616 - 5538506

12891

ENSAPLT00000029501

5525616 - 5538506

12891

ENSAPLT00000020883

5531647 - 5538506

6860