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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5557020_5557263_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5557020 - 5557263

Intron Length:

244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGGGCG

5'SS Class:

major

3'SS Sequence:

TCTCTCCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAA

U12 Branch Point Sequence:

TCCCTCTCAACC

Flanking Amino Acid:

RRLGDLGIHSGDTLIVEEDP

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

57.4

41.8

Major BPS

73.4

0.58

0.9

75.3

29.7

Major PPT

76.2

0.59

0.9

72.3

32.5

Minor 5ss

23.7

-3

3.2

21.5

37.3

Minor BPS

56.9

0.2

1.6

63.43

42.2

Associated Gene:

Gene:

YOD1

Ensembl Gene ID:

ENSAPLG00000001842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001837

5556689 - 5558499

1811