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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5598544_5598935_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5598544 - 5598935

Intron Length:

392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTACA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

TCTCTTTGCACA

Flanking Amino Acid:

SYKVSLDISEGPNVPEEAEL

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

82.6

29.6

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

78.9

0.65

0.9

75.1

33.3

Minor 5ss

36.1

-1.6

2.6

Minor BPS

-0.2

1.8

60.67

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016281

5597908 - 5604693

6786