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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5599938_5600033_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5599938 - 5600033

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTCAGTAA

5'SS Class:

weak_major

3'SS Sequence:

TCTCGGATCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAGAAT

U12 Branch Point Sequence:

TGTTCTCGGATC

Flanking Amino Acid:

GKSTVTGVKGENTGFVFDTY

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.3

0.22

1.2

57.5

37.8

Major BPS

48.5

-0

1.4

56.1

37.3

Major PPT

64.4

0.33

0.9

57.5

37.4

Minor 5ss

30.7

-2.2

3.3

38.4

46.6

Minor BPS

48.4

-0.1

1.8

63.77

35.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016281

5597908 - 5604693

6786