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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5600214_5600612_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5600214 - 5600612

Intron Length:

399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCAGTT

5'SS Class:

major

3'SS Sequence:

TTTGCCCTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCATCAT

U12 Branch Point Sequence:

TTTGCCCTCACA

Flanking Amino Acid:

KSSKELKVVEGEPGLKGKED

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.2

71.6

38.5

Major BPS

57.9

0.2

1.4

44.2

Major PPT

79.2

0.66

0.8

72.8

32.1

Minor 5ss

-0.2

3.3

73.4

43.4

Minor BPS

55.1

0.15

2.2

75.88

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016281

5597908 - 5604693

6786