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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5603311_5604120_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5603311 - 5604120

Intron Length:

810

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TATCCTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCACCAT

U12 Branch Point Sequence:

TGTCCCTCACCA

Flanking Amino Acid:

STAETKKAKRSSKEDADLAY

Intron Amino Acid Position:

649

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

78.9

35.3

Major BPS

0.08

1.4

42.7

Major PPT

82.9

0.74

0.8

77.4

30.9

Minor 5ss

35.9

-1.6

3.6

48.1

47.5

Minor BPS

55.7

0.18

1.9

70.34

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016281

5597908 - 5604693

6786