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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5617059_5618545_R

Intron Information:

Intron Rank:

148164

Intron Class:

major

Intron Phase:

Intron Coordinates:

5617059 - 5618545

Intron Length:

1487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGTAGG

5'SS Class:

major

3'SS Sequence:

GTCTCCCCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTTTATTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.4

47.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

73.3

0.53

0.8

69.8

Minor 5ss

-1.5

2.7

47.1

41.6

Minor BPS

61.5

0.34

1.5

70.16

35.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027014

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028372

5615602 - 5620119

4518