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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5643721_5644097_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5643721 - 5644097

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCCC

5'SS Class:

strong_major

3'SS Sequence:

CCCCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CGGTGCTGACGG

Flanking Amino Acid:

EEKDLWEDVKEEMTSALATM

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

66.5

39.1

Major BPS

66.3

0.4

1.1

41.8

Major PPT

70.9

0.47

0.7

64.7

23.9

Minor 5ss

26.6

-2.7

3.1

33.5

41.9

Minor BPS

36.7

-1.1

2.2

36.1

45.5

Associated Gene:

Gene:

MAPKAPK2

Ensembl Gene ID:

ENSAPLG00000015379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016022

5643577 - 5646633

3057