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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5692868_5693527_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5692868 - 5693527

Intron Length:

660

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGAGG

5'SS Class:

major

3'SS Sequence:

TGTCTTTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

CCTGCTGTAATG

Flanking Amino Acid:

MLCAVTLSGNRAPVAVSVAT

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

57.8

46.6

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

83.6

0.75

0.8

76.4

37.6

Minor 5ss

29.9

-2.3

3.3

39.8

45.8

Minor BPS

45.9

-0.4

2.1

49.65

45.6

Associated Gene:

Gene:

EIF2D

Ensembl Gene ID:

ENSAPLG00000014849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015497

5689189 - 5700376

11188