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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5693636_5694272_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5693636 - 5694272

Intron Length:

637

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCATA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAA

U12 Branch Point Sequence:

CTTCCTTTTATA

Flanking Amino Acid:

AVLHTYMDHLWEYGDKSYPP

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

0.9

75.8

35.2

Major BPS

70.2

0.5

71.6

30.1

Major PPT

84.2

0.77

0.7

79.7

25.9

Minor 5ss

37.7

-1.4

45.4

43.9

Minor BPS

58.3

0.25

1.6

68.17

38.4

Associated Gene:

Gene:

EIF2D

Ensembl Gene ID:

ENSAPLG00000014849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015497

5689189 - 5700376

11188