Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_27_5694893_5695271_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5694893 - 5695271

Intron Length:

379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACGTGGT

5'SS Class:

major

3'SS Sequence:

TATCAATTTATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

AGACCTTTAAAA

Flanking Amino Acid:

TFLRSHMFPCCPAGQQLDIK

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

41.9

Major BPS

73.1

0.58

79.6

29.1

Major PPT

0.52

0.9

66.1

39.3

Minor 5ss

33.5

-1.9

3.5

46.5

44.1

Minor BPS

58.9

0.28

1.4

62.74

36.4

Associated Gene:

Gene:

EIF2D

Ensembl Gene ID:

ENSAPLG00000014849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015497

5689189 - 5700376

11188