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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5705767_5707188_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5705767 - 5707188

Intron Length:

1422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTATTGCTG

5'SS Class:

weak_major

3'SS Sequence:

GGCTTCATCAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCAGAA

U12 Branch Point Sequence:

GCTTCATCAAAG

Flanking Amino Acid:

VTNCLLMKLVLHLKLRRPVT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.3

0.08

1.4

49.8

46.2

Major BPS

64.9

0.37

37.5

Major PPT

57.3

0.16

1.1

Minor 5ss

41.9

-0.9

3.3

54.9

Minor BPS

47.8

-0.3

55.37

Associated Gene:

Gene:

RASSF5

Ensembl Gene ID:

ENSAPLG00000014759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015376

5704147 - 5716553

12407