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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5707304_5716433_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5707304 - 5716433

Intron Length:

9130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAGCT

5'SS Class:

major

3'SS Sequence:

CCTCTCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTCCAT

U12 Branch Point Sequence:

CATATATCAGCC

Flanking Amino Acid:

RSTPSKVPAKNVTKTVEEKP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

72.5

37.3

Major BPS

68.5

0.46

1.2

78.5

35.1

Major PPT

83.4

0.75

0.7

80.4

24.9

Minor 5ss

38.6

-1.3

3.4

57.4

46.8

Minor BPS

41.5

-0.6

1.9

49.68

40.2

Associated Gene:

Gene:

RASSF5

Ensembl Gene ID:

ENSAPLG00000014759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015376

5704147 - 5716553

12407