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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5734838_5735330_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5734838 - 5735330

Intron Length:

493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAGGTCCC

5'SS Class:

major

3'SS Sequence:

TCCATCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAT

U12 Branch Point Sequence:

ATGTCTCCATCT

Flanking Amino Acid:

AMECQECLQHALDTFPQMAL

Intron Amino Acid Position:

654

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.2

0.41

1.4

61.6

41.6

Major BPS

64.7

0.37

1.3

74.7

Major PPT

78.9

0.65

0.8

72.9

31.8

Minor 5ss

35.5

-1.6

3.1

44.4

36.4

Minor BPS

45.8

-0.2

67.28

43.5

Associated Gene:

Gene:

IKBKE

Ensembl Gene ID:

ENSAPLG00000014351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014989

5733639 - 5743528

9890