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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5736789_5737284_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5736789 - 5737284

Intron Length:

496

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCAGC

5'SS Class:

major

3'SS Sequence:

CTCCTGCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAACAT

U12 Branch Point Sequence:

GCTCCCTTCCCC

Flanking Amino Acid:

YNEEQIHKLDKVNLGHLARK

Intron Amino Acid Position:

587

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

69.9

41.1

Major BPS

62.2

0.3

1.1

69.4

35.8

Major PPT

79.6

0.67

0.8

76.2

32.4

Minor 5ss

41.4

-1

2.9

52.4

38.7

Minor BPS

40.6

-0.7

3.6

60.39

44.8

Associated Gene:

Gene:

IKBKE

Ensembl Gene ID:

ENSAPLG00000014351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014989

5733639 - 5743528

9890