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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5738843_5739364_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5738843 - 5739364

Intron Length:

522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

TCTCTTGTGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATGTAT

U12 Branch Point Sequence:

AGGCAGAAAACA

Flanking Amino Acid:

ELVARGLHWVIGNLKSECSR

Intron Amino Acid Position:

451

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

71.3

32.2

Major BPS

48.4

-0.1

1.5

49.4

Major PPT

0.56

72.2

37.8

Minor 5ss

30.9

-2.2

3.2

40.5

38.7

Minor BPS

34.1

-1.2

2.3

42.08

38.3

Associated Gene:

Gene:

IKBKE

Ensembl Gene ID:

ENSAPLG00000014351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014989

5733639 - 5743528

9890